Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family atpF-atpH psbA-trnH trnL CD trnL GH rbcL matK ITS Number of Regions

Acanthaceae

Wikipedia
ToL Taxonomy
15 231 12 20 4

Aceraceae

Wikipedia
ToL Taxonomy
42 118 2

Actinidiaceae

Wikipedia
ToL Taxonomy
37 29 2

Adoxaceae

Wikipedia
ToL Taxonomy
81 14 2

Aizoaceae

Wikipedia
ToL Taxonomy
218 12 2

Amaranthaceae

Wikipedia
ToL Taxonomy
150 70 2

Amaryllidaceae

Wikipedia
ToL Taxonomy
18 440 19 150 920 5

Anacardiaceae

Wikipedia
ToL Taxonomy
140 55 2

Annonaceae

Wikipedia
ToL Taxonomy
129 87 670 289 23 5

Apiaceae

Wikipedia
ToL Taxonomy
11 99 188 12 1073 5

Apocynaceae

Wikipedia
ToL Taxonomy
58 22 810 76 4

Aquifoliaceae

Wikipedia
ToL Taxonomy
108 1

Araceae

Wikipedia
ToL Taxonomy
34 63 434 27 287 5

Araliaceae

Wikipedia
ToL Taxonomy
115 321 20 3

Arecaceae

Wikipedia
ToL Taxonomy
24 300 53 237 4

Aristolochiaceae

Wikipedia
ToL Taxonomy
75 96 2

Asparagaceae

Wikipedia
ToL Taxonomy
24 159 27 159 95 5

Asteliaceae

Wikipedia
ToL Taxonomy
38 1

Asteraceae

Wikipedia
ToL Taxonomy
62 275 283 1955 126 603 1155 7

Begoniaceae

Wikipedia
ToL Taxonomy
97 24 31 3

Berberidaceae

Wikipedia
ToL Taxonomy
54 64 52 3

Betulaceae

Wikipedia
ToL Taxonomy
42 58 14 3

Bignoniaceae

Wikipedia
ToL Taxonomy
121 1

Boraginaceae

Wikipedia
ToL Taxonomy
102 27 405 24 4

Brassicaceae

Wikipedia
ToL Taxonomy
14 16 176 1236 98 58 6

Bromeliaceae

Wikipedia
ToL Taxonomy
313 265 2

Burseraceae

Wikipedia
ToL Taxonomy
62 20 69 3

Cactaceae

Wikipedia
ToL Taxonomy
15 84 449 278 4

Calceolariaceae

Wikipedia
ToL Taxonomy
12 1

Calycanthaceae

Wikipedia
ToL Taxonomy
12 1

Campanulaceae

Wikipedia
ToL Taxonomy
33 288 62 324 4

Canellaceae

Wikipedia
ToL Taxonomy
14 1

Cannabaceae

Wikipedia
ToL Taxonomy
22 1

Capparaceae

Wikipedia
ToL Taxonomy
22 50 2

Caprifoliaceae

Wikipedia
ToL Taxonomy
18 241 10 21 4

Caricaceae

Wikipedia
ToL Taxonomy
31 1

Caryophyllaceae

Wikipedia
ToL Taxonomy
28 189 96 3

Celastraceae

Wikipedia
ToL Taxonomy
26 265 55 3

Cephalotaxaceae

Wikipedia
ToL Taxonomy
13 13 2

Chloranthaceae

Wikipedia
ToL Taxonomy
51 1

Chrysobalanaceae

Wikipedia
ToL Taxonomy
10 1

Clethraceae

Wikipedia
ToL Taxonomy
21 1

Clusiaceae

Wikipedia
ToL Taxonomy
17 1

Colchicaceae

Wikipedia
ToL Taxonomy
12 54 217 12 4

Convolvulaceae

Wikipedia
ToL Taxonomy
12 225 18 3

Coriariaceae

Wikipedia
ToL Taxonomy
10 1

Cornaceae

Wikipedia
ToL Taxonomy
39 16 10 3

Costaceae

Wikipedia
ToL Taxonomy
55 1

Crassulaceae

Wikipedia
ToL Taxonomy
177 1

Cucurbitaceae

Wikipedia
ToL Taxonomy
196 416 12 3

Cunoniaceae

Wikipedia
ToL Taxonomy
30 1

Cupressaceae

Wikipedia
ToL Taxonomy
17 17 133 17 23 118 6

Cyperaceae

Wikipedia
ToL Taxonomy
28 42 591 3

Dioscoreaceae

Wikipedia
ToL Taxonomy
51 62 33 3

Dipterocarpaceae

Wikipedia
ToL Taxonomy
169 1

Ebenaceae

Wikipedia
ToL Taxonomy
130 86 2

Elaeagnaceae

Wikipedia
ToL Taxonomy
23 1

Elaeocarpaceae

Wikipedia
ToL Taxonomy
65 1

Ephedraceae

Wikipedia
ToL Taxonomy
21 18 12 3

Ericaceae

Wikipedia
ToL Taxonomy
10 344 27 192 93 5

Euphorbiaceae

Wikipedia
ToL Taxonomy
39 796 12 179 4

Fabaceae

Wikipedia
ToL Taxonomy
358 232 2599 1476 49 5

Fagaceae

Wikipedia
ToL Taxonomy
10 89 22 56 163 5

Gentianaceae

Wikipedia
ToL Taxonomy
47 406 2

Geraniaceae

Wikipedia
ToL Taxonomy
160 14 2

Gesneriaceae

Wikipedia
ToL Taxonomy
213 21 556 135 4

Goodeniaceae

Wikipedia
ToL Taxonomy
13 164 2

Haemodoraceae

Wikipedia
ToL Taxonomy
51 1

Hamamelidaceae

Wikipedia
ToL Taxonomy
19 47 11 33 4

Hyacinthaceae

Wikipedia
ToL Taxonomy
21 260 20 3

Hydrangeaceae

Wikipedia
ToL Taxonomy
34 14 23 3

Hypoxidaceae

Wikipedia
ToL Taxonomy
47 11 2

Iridaceae

Wikipedia
ToL Taxonomy
22 61 15 518 210 350 6

Isoetaceae

Wikipedia
ToL Taxonomy
14 1

Juglandaceae

Wikipedia
ToL Taxonomy
18 20 2

Juncaceae

Wikipedia
ToL Taxonomy
48 90 2

Lamiaceae

Wikipedia
ToL Taxonomy
84 22 707 178 20 5

Lardizabalaceae

Wikipedia
ToL Taxonomy
18 1

Lauraceae

Wikipedia
ToL Taxonomy
36 56 21 52 4

Lecythidaceae

Wikipedia
ToL Taxonomy
110 1

Lentibulariaceae

Wikipedia
ToL Taxonomy
18 75 30 3

Liliaceae

Wikipedia
ToL Taxonomy
37 15 160 129 416 5

Limnanthaceae

Wikipedia
ToL Taxonomy
19 1

Linaceae

Wikipedia
ToL Taxonomy
16 59 22 3

Loasaceae

Wikipedia
ToL Taxonomy
10 119 65 3

Loganiaceae

Wikipedia
ToL Taxonomy
19 1

Loranthaceae

Wikipedia
ToL Taxonomy
12 79 2

Lowiaceae

Wikipedia
ToL Taxonomy
15 1

Lycopodiaceae

Wikipedia
ToL Taxonomy
39 1

Lygodiaceae

Wikipedia
ToL Taxonomy
14 1

Lythraceae

Wikipedia
ToL Taxonomy
39 23 2

Magnoliaceae

Wikipedia
ToL Taxonomy
23 10 48 73 4

Malpighiaceae

Wikipedia
ToL Taxonomy
75 179 15 3

Malvaceae

Wikipedia
ToL Taxonomy
24 214 142 665 4

Marantaceae

Wikipedia
ToL Taxonomy
87 45 2

Marattiaceae

Wikipedia
ToL Taxonomy
41 1

Marcgraviaceae

Wikipedia
ToL Taxonomy
14 1

Melanthiaceae

Wikipedia
ToL Taxonomy
19 19 83 75 4

Meliaceae

Wikipedia
ToL Taxonomy
39 1

Melianthaceae

Wikipedia
ToL Taxonomy
14 1

Menispermaceae

Wikipedia
ToL Taxonomy
96 1

Moraceae

Wikipedia
ToL Taxonomy
67 84 70 449 4

Musaceae

Wikipedia
ToL Taxonomy
36 29 70 3

Myodocarpaceae

Wikipedia
ToL Taxonomy
18 1

Myricaceae

Wikipedia
ToL Taxonomy
29 1

Myristicaceae

Wikipedia
ToL Taxonomy
14 13 2

Myrtaceae

Wikipedia
ToL Taxonomy
44 123 127 3

Nartheciaceae

Wikipedia
ToL Taxonomy
25 14 2

Nepenthaceae

Wikipedia
ToL Taxonomy
11 80 2

Nothofagaceae

Wikipedia
ToL Taxonomy
12 1

Nymphaeaceae

Wikipedia
ToL Taxonomy
53 33 2

Ochnaceae

Wikipedia
ToL Taxonomy
11 1

Oleaceae

Wikipedia
ToL Taxonomy
11 13 135 21 16 5

Onagraceae

Wikipedia
ToL Taxonomy
200 1

Orchidaceae

Wikipedia
ToL Taxonomy
21 68 40 1538 16 1038 51 7

Orobanchaceae

Wikipedia
ToL Taxonomy
24 57 320 12 102 10 6

Osmundaceae

Wikipedia
ToL Taxonomy
15 1

Oxalidaceae

Wikipedia
ToL Taxonomy
246 12 2

Pandanaceae

Wikipedia
ToL Taxonomy
36 1

Papaveraceae

Wikipedia
ToL Taxonomy
115 48 2

Passifloraceae

Wikipedia
ToL Taxonomy
31 170 2

Pentaphylacaceae

Wikipedia
ToL Taxonomy
39 11 2

Phrymaceae

Wikipedia
ToL Taxonomy
119 1

Piperaceae

Wikipedia
ToL Taxonomy
21 61 12 121 4

Pittosporaceae

Wikipedia
ToL Taxonomy
34 1

Plantaginaceae

Wikipedia
ToL Taxonomy
13 451 47 3

Plumbaginaceae

Wikipedia
ToL Taxonomy
26 1

Poaceae

Wikipedia
ToL Taxonomy
181 425 397 2078 107 476 830 7

Podocarpaceae

Wikipedia
ToL Taxonomy
102 13 2

Podostemaceae

Wikipedia
ToL Taxonomy
35 163 2

Polemoniaceae

Wikipedia
ToL Taxonomy
219 1

Polygalaceae

Wikipedia
ToL Taxonomy
275 1

Polygonaceae

Wikipedia
ToL Taxonomy
49 12 215 19 58 39 6

Potamogetonaceae

Wikipedia
ToL Taxonomy
34 49 2

Primulaceae

Wikipedia
ToL Taxonomy
14 30 222 223 577 5

Proteaceae

Wikipedia
ToL Taxonomy
156 119 2

Pteridaceae

Wikipedia
ToL Taxonomy
17 11 18 3

Ranunculaceae

Wikipedia
ToL Taxonomy
19 114 343 279 4

Restionaceae

Wikipedia
ToL Taxonomy
217 96 241 3

Rhamnaceae

Wikipedia
ToL Taxonomy
159 1

Rosaceae

Wikipedia
ToL Taxonomy
22 228 21 766 273 581 6

Rubiaceae

Wikipedia
ToL Taxonomy
11 115 335 1427 42 49 6

Rutaceae

Wikipedia
ToL Taxonomy
17 186 152 3

Salicaceae

Wikipedia
ToL Taxonomy
11 11 17 124 176 5

Sapindaceae

Wikipedia
ToL Taxonomy
207 60 2

Sapotaceae

Wikipedia
ToL Taxonomy
84 1

Saxifragaceae

Wikipedia
ToL Taxonomy
20 12 105 20 4

Schisandraceae

Wikipedia
ToL Taxonomy
33 1

Scrophulariaceae

Wikipedia
ToL Taxonomy
49 198 10 3

Simaroubaceae

Wikipedia
ToL Taxonomy
15 30 57 3

Smilacaceae

Wikipedia
ToL Taxonomy
12 1

Solanaceae

Wikipedia
ToL Taxonomy
160 26 721 100 4

Stachyuraceae

Wikipedia
ToL Taxonomy
18 1

Stilbaceae

Wikipedia
ToL Taxonomy
13 15 2

Styracaceae

Wikipedia
ToL Taxonomy
22 1

Symplocaceae

Wikipedia
ToL Taxonomy
84 77 2

Taxaceae

Wikipedia
ToL Taxonomy
24 12 42 27 4

Theaceae

Wikipedia
ToL Taxonomy
19 82 30 98 4

Thesiaceae

Wikipedia
ToL Taxonomy
57 1

Thymelaeaceae

Wikipedia
ToL Taxonomy
202 1

Tofieldiaceae

Wikipedia
ToL Taxonomy
22 24 2

Typhaceae

Wikipedia
ToL Taxonomy
17 1

Ulmaceae

Wikipedia
ToL Taxonomy
12 1

Urticaceae

Wikipedia
ToL Taxonomy
117 1

Velloziaceae

Wikipedia
ToL Taxonomy
17 1

Verbenaceae

Wikipedia
ToL Taxonomy
38 161 2

Violaceae

Wikipedia
ToL Taxonomy
48 49 192 51 130 5

Vitaceae

Wikipedia
ToL Taxonomy
115 36 300 3

Winteraceae

Wikipedia
ToL Taxonomy
20 1

Xanthorrhoeaceae

Wikipedia
ToL Taxonomy
45 139 57 3

Zamiaceae

Wikipedia
ToL Taxonomy
64 55 26 89 4

Zingiberaceae

Wikipedia
ToL Taxonomy
16 120 171 65 4

Zygophyllaceae

Wikipedia
ToL Taxonomy
125 1